Differentially expressed genes - L2 vs. L1

DEGs for L2:L1

We identified 74 DEGs for L2:L1 when the following criteria were applied and L1 was used as control.

  1. abs(LFC) >= 0
  2. Adjusted p-value < 0.05

Relevant Excel files

Excel files (Downloads page) contain more information than the list presented here.

  • Dataset_01_DEG.xlsx
  • Dataset_02_KEGG_DEG.xlsx
  • Dataset_09_DEG_DMC.xlsx

List of DEGs between L1 and L2 diets

Gene ID LFC Adj p-val Gene symbol Gene name
106601178 0.94 6.2E-06 LOC106601178 NF-kappa-B inhibitor alpha-like
106566064 -2.6 4.6E-05 LOC106566064 guanine nucleotide-binding protein G(i) subunit alpha-2
100195198 0.52 2.5E-04 vps37a VPS37A, ESCRT-I subunit
106602919 1.23 2.5E-04 LOC106602919 putative monooxygenase p33MONOX
106605529 2.07 2.5E-04 LOC106605529 Krueppel-like factor 10
106570829 -2.6 2.9E-04 hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase
100136518 1.78 4.5E-04 igfbp-1b1 IGF binding protein 1
106590962 7.0 4.5E-04 LOC106590962 ladderlectin-like
106607496 0.99 1.7E-03 LOC106607496 nuclear receptor subfamily 1 group D member 1-like
106577245 -0.87 2.1E-03 LOC106577245 S-adenosylmethionine synthase isoform type-1
106564571 -1.33 2.1E-03 LOC106564571 glutaryl-CoA dehydrogenase, mitochondrial-like
106599445 0.56 2.3E-03 LOC106599445 high affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A-like
106611175 0.77 2.3E-03 LOC106611175 NF-kappa-B inhibitor alpha-like
101448021 -0.72 2.3E-03 gbp GSK-3-binding protein
106577132 0.95 2.3E-03 LOC106577132 protein phosphatase 1 regulatory subunit 3C-B-like
106607162 0.83 2.3E-03 LOC106607162 thyrotroph embryonic factor-like
106581851 -1.55 3.7E-03 lss lanosterol synthase
106591920 -1.14 3.7E-03 LOC106591920 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase-like
106570088 0.82 4.5E-03 ciart circadian associated repressor of transcription
106584416 -0.93 5.0E-03 LOC106584416 SHC-transforming protein 2-like
106584490 1.21 5.0E-03 LOC106584490 cyclin-dependent kinase inhibitor 1B-like
106605774 0.96 5.4E-03 dbp D-box binding PAR bZIP transcription factor
106581529 -0.33 5.6E-03 tmem97 transmembrane protein 97
106608520 0.57 5.6E-03 LOC106608520 period circadian protein homolog 1-like
106612954 0.98 5.6E-03 LOC106612954 serine/threonine-protein kinase ULK2-like
106601031 1.45 5.6E-03 LOC106601031 coenzyme Q-binding protein COQ10 homolog, mitochondrial-like
106571979 -3.04 5.6E-03 LOC106571979 uncharacterized LOC106571979
106568718 0.95 7.9E-03 LOC106568718 phosphoglucomutase-1-like
106587488 0.45 7.9E-03 LOC106587488 fibrinogen-like protein 1-like protein
106585598 -0.61 8.0E-03 LOC106585598 anthrax toxin receptor 1-like
100194614 1.0 8.2E-03 ppdpf c20orf149 protein
106582110 0.99 9.4E-03 LOC106582110 nuclear receptor subfamily 1 group D member 2-like
106585060 2.33 9.4E-03 LOC106585060 B-cell linker protein-like
106577395 1.51 9.4E-03 LOC106577395 DNA damage-inducible transcript 4 protein-like
106587139 -0.7 9.8E-03 LOC106587139 7-dehydrocholesterol reductase-like
106569523 0.43 1.0E-02 LOC106569523 ubiquitin-conjugating enzyme E2 R1-like
106563389 0.85 1.2E-02 LOC106563389 period circadian protein homolog 1-like
106585026 0.66 1.3E-02 LOC106585026 serine/threonine-protein kinase PLK2-like
106604248 -1.62 1.3E-02 LOC106604248 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating-like
106608133 2.29 1.3E-02 LOC106608133 type III iodothyronine deiodinase-like
106561658 -0.55 1.3E-02 LOC106561658 probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial
106561770 1.13 1.3E-02 LOC106561770 ras-GEF domain-containing family member 1B-B-like
106601335 -1.76 1.4E-02 LOC106601335 solute carrier family 25 member 38-B-like
106562333 -1.48 1.4E-02 LOC106562333 vitamin D 25-hydroxylase-like
106578021 1.15 1.4E-02 LOC106578021 purine nucleoside phosphorylase-like
106568762 1.95 1.4E-02 LOC106568762 B-cell lymphoma 6 protein-like
100136924 0.78 1.4E-02 tap2b transport-associated protein 2b
106605924 -1.75 1.6E-02 LOC106605924 farnesyl pyrophosphate synthase-like
106569872 0.58 1.7E-02 LOC106569872 semaphorin-4A-like
106591002 -0.96 1.8E-02 LOC106591002 probable ergosterol biosynthetic protein 28
106605810 0.89 1.8E-02 LOC106605810 hepatic leukemia factor-like
106605546 -3.54 1.8E-02 LOC106605546 squalene monooxygenase-like
106580424 1.56 1.9E-02 LOC106580424 B-cell linker protein-like
106587180 -0.74 1.9E-02 LOC106587180 cytochrome b5-like
106601029 0.56 2.0E-02 LOC106601029 serine/threonine-protein kinase 17A-like
106577570 0.41 2.0E-02 LOC106577570 regulator of G-protein signaling 12-like
106565446 -4.63 2.2E-02 LOC106565446 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial-like
106565076 1.35 2.3E-02 LOC106565076 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial-like
106568833 -1.64 2.3E-02 LOC106568833 frizzled-8-like
106601460 1.44 2.4E-02 LOC106601460 serine/threonine-protein kinase SBK1-like
106608090 0.78 2.4E-02 LOC106608090 CLOCK-interacting pacemaker-like
106574392 3.79 2.4E-02 LOC106574392 ladderlectin-like
106588186 0.95 2.5E-02 LOC106588186 uncharacterized LOC106588186
106601241 1.16 2.6E-02 LOC106601241 thyrotroph embryonic factor-like
106576759 -1.94 2.7E-02 LOC106576759 alpha-2,8-sialyltransferase 8E-like
106588334 -0.43 3.2E-02 LOC106588334 acidic leucine-rich nuclear phosphoprotein 32 family member E
106605773 0.89 3.4E-02 LOC106605773 hepatic leukemia factor-like
106589320 0.95 3.4E-02 LOC106589320 growth factor receptor-bound protein 7-like
106613963 0.91 3.5E-02 LOC106613963 transcription factor AP-1-like
106565564 1.05 3.5E-02 LOC106565564 inositol hexakisphosphate kinase 2-like
106579093 -1.84 3.7E-02 LOC106579093 squalene monooxygenase-like
106592479 1.99 3.8E-02 LOC106592479 DNA damage-inducible transcript 4 protein-like
106585808 0.78 3.9E-02 LOC106585808 metallo-beta-lactamase domain-containing protein 2-like
106598858 -0.5 4.0E-02 LOC106598858 succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial-like